absorp tecator anovaScores caretSBF as.data.frame.resamples resamples as.matrix.confusionMatrix as.matrix.confusionMatrix as.matrix.resamples resamples as.table.confusionMatrix as.matrix.confusionMatrix avNNet avNNet avNNet.default avNNet avNNet.formula avNNet bag bag bag.default bag bagControl bag bagEarth bagEarth bagEarth.default bagEarth bagEarth.formula bagEarth bagEarthStats caret-internal bagFDA bagFDA bagFDA.default bagFDA bagFDA.formula bagFDA bbbDescr BloodBrain best oneSE BloodBrain BloodBrain BoxCoxTrans BoxCoxTrans BoxCoxTrans.default BoxCoxTrans bwplot.diff.resamples dotplot.diff.resamples bwplot.resamples xyplot.resamples calibration calibration calibration.default calibration calibration.formula calibration caret-internal caret-internal caretFuncs caretFuncs caretGA gafs_initial caretSA safs_initial caretSBF caretSBF caretTheme caret-internal cars cars cforestStats caret-internal checkConditionalX nearZeroVar checkInstall modelLookup checkResamples nearZeroVar class2ind dummyVars classDist classDist classDist.default classDist cluster prcomp.resamples cluster.resamples prcomp.resamples compare_models diff.resamples confusionMatrix confusionMatrix confusionMatrix.default confusionMatrix confusionMatrix.matrix confusionMatrix confusionMatrix.rfe confusionMatrix.train confusionMatrix.sbf confusionMatrix.train confusionMatrix.table confusionMatrix confusionMatrix.train confusionMatrix.train contr.dummy dummyVars contr.ltfr dummyVars cox2 cox2 cox2Class cox2 cox2Descr cox2 cox2IC50 cox2 createDataPartition createDataPartition createFolds createDataPartition createModel caret-internal createMultiFolds createDataPartition createResample createDataPartition createTimeSlices createDataPartition ctreeBag bag defaultSummary postResample densityplot.diff.resamples dotplot.diff.resamples densityplot.resamples xyplot.resamples densityplot.rfe densityplot.rfe densityplot.train histogram.train dhfr dhfr diff.resamples diff.resamples dotPlot dotPlot dotplot.diff.resamples dotplot.diff.resamples dotplot.resamples xyplot.resamples downSample downSample dummyVars dummyVars dummyVars.default dummyVars endpoints tecator expandParameters caret-internal expoTrans BoxCoxTrans expoTrans.default BoxCoxTrans extractPrediction predict.train extractProb predict.train fattyAcids oil featurePlot featurePlot filterVarImp filterVarImp findCorrelation findCorrelation findLinearCombos findLinearCombos flatTable caret-internal format.bagEarth format.bagEarth F_meas recall F_meas.default recall F_meas.table recall gafs gafs.default gafs.default gafs.default gafs.recipe gafs.default gafsControl safsControl gafs_initial gafs_initial gafs_lrSelection gafs_initial gafs_nlrSelection gafs_initial gafs_raMutation gafs_initial gafs_rwSelection gafs_initial gafs_spCrossover gafs_initial gafs_tourSelection gafs_initial gafs_uCrossover gafs_initial gamFormula caret-internal gamFuncs caretFuncs gamScores caretSBF GermanCredit GermanCredit getModelInfo modelLookup getSamplingInfo getSamplingInfo getTrainPerf postResample ggplot.calibration calibration ggplot.gafs plot.gafs ggplot.lift lift ggplot.resamples xyplot.resamples ggplot.rfe plot.rfe ggplot.safs plot.gafs ggplot.train plot.train ggplot.varImp.train plot.varImp.train groupKFold createDataPartition hasTerms caret-internal histogram.rfe densityplot.rfe histogram.train histogram.train icr icr.formula icr.default icr.formula icr.formula icr.formula index2vec index2vec ipredStats caret-internal knn3 knn3 knn3.data.frame knn3 knn3.formula knn3 knn3.matrix knn3 knn3Train knn3 knnreg knnreg knnreg.data.frame knnreg knnreg.default knnreg knnreg.formula knnreg knnreg.matrix knnreg knnregTrain knnreg ldaBag bag ldaFuncs caretFuncs ldaSBF caretSBF learning_curve_dat learning_curve_dat levelplot.diff.resamples dotplot.diff.resamples lift lift lift.default lift lift.formula lift lmFuncs caretFuncs lmSBF caretSBF logBBB BloodBrain LPH07_1 twoClassSim LPH07_2 twoClassSim lrFuncs caretFuncs MAE postResample maxDissim maxDissim mdrr mdrr mdrrClass mdrr mdrrDescr mdrr MeanSD caret-internal minDiss maxDissim mnLogLoss postResample modelCor resamples modelLookup modelLookup models models multiClassSummary postResample nbBag bag nbFuncs caretFuncs nbSBF caretSBF nearZeroVar nearZeroVar negPredValue sensitivity negPredValue.default sensitivity negPredValue.matrix sensitivity negPredValue.table sensitivity nnetBag bag nullModel nullModel nullModel.default nullModel nzv nearZeroVar oil oil oilType oil oneSE oneSE outcome_conversion caret-internal panel.calibration calibration panel.lift panel.lift2 panel.lift2 panel.lift2 panel.needle panel.needle parallelplot.resamples xyplot.resamples pcaNNet pcaNNet pcaNNet.default pcaNNet pcaNNet.formula pcaNNet pickSizeBest caretFuncs pickSizeTolerance caretFuncs pickVars caretFuncs plot.gafs plot.gafs plot.prcomp.resamples prcomp.resamples plot.rfe plot.rfe plot.safs plot.gafs plot.train plot.train plot.varImp.train plot.varImp.train plotClassProbs plotClassProbs plotObsVsPred plotObsVsPred plsBag bag plsda plsda plsda.default plsda posPredValue sensitivity posPredValue.default sensitivity posPredValue.matrix sensitivity posPredValue.table sensitivity postResample postResample pottery pottery potteryClass pottery prcomp.resamples prcomp.resamples precision recall precision.default recall precision.matrix recall precision.table recall predict.avNNet avNNet predict.bag bag predict.bagEarth predict.bagEarth predict.bagFDA predict.bagEarth predict.BoxCoxTrans BoxCoxTrans predict.classDist classDist predict.dummyVars dummyVars predict.expoTrans BoxCoxTrans predict.gafs predict.gafs predict.icr icr.formula predict.knn3 predict.knn3 predict.knnreg predict.knnreg predict.list predict.train predict.nullModel nullModel predict.pcaNNet pcaNNet predict.plsda plsda predict.preProcess preProcess predict.rfe rfe predict.safs predict.gafs predict.sbf sbf predict.splsda plsda predict.train predict.train predictionFunction caret-internal predictors predictors predictors.default predictors predictors.formula predictors predictors.list predictors predictors.rfe predictors predictors.sbf predictors predictors.terms predictors predictors.train predictors preProcess preProcess preProcess.default preProcess print.avNNet avNNet print.bag bag print.bagEarth bagEarth print.bagFDA bagFDA print.BoxCoxTrans BoxCoxTrans print.calibration calibration print.confusionMatrix print.confusionMatrix print.dummyVars dummyVars print.knn3 knn3 print.knnreg knnreg print.lift lift print.pcaNNet pcaNNet print.resamples resamples print.summary.bag bag print.train print.train probFunction caret-internal progress caret-internal prSummary postResample R2 postResample recall recall recall.default recall recall.table recall resampleHist resampleHist resamples resamples resamples.default resamples resampleSummary resampleSummary resampleWrapper caret-internal rfe rfe rfe.default rfe rfe.formula rfe rfe.recipe rfe rfeControl rfeControl rfeIter rfe rfFuncs caretFuncs rfGA gafs_initial rfSA safs_initial rfSBF caretSBF rfStats caret-internal RMSE postResample Sacramento Sacramento safs safs safs.default safs safs.recipe safs safsControl safsControl safs_initial safs_initial safs_perturb safs_initial safs_prob safs_initial sbf sbf sbf.default sbf sbf.formula sbf sbf.recipe sbf sbfControl sbfControl sbfIter caret-internal scat scat scat_orig scat segmentationData segmentationData sensitivity sensitivity sensitivity.default sensitivity sensitivity.matrix sensitivity sensitivity.table sensitivity SLC14_1 twoClassSim SLC14_2 twoClassSim sort.resamples resamples sortImp caret-internal spatialSign spatialSign spatialSign.data.frame spatialSign spatialSign.default spatialSign spatialSign.matrix spatialSign specificity sensitivity specificity.default sensitivity specificity.matrix sensitivity specificity.table sensitivity splom.resamples xyplot.resamples splsda plsda splsda.default plsda stripplot.rfe densityplot.rfe stripplot.train histogram.train sumDiss maxDissim summary.bag bag summary.bagEarth summary.bagEarth summary.bagFDA summary.bagEarth summary.diff.resamples diff.resamples summary.resamples resamples svmBag bag tecator tecator thresholder thresholder tolerance oneSE train train train.default train train.formula train train.recipe train trainControl trainControl train_model_list models treebagFuncs caretFuncs treebagGA gafs_initial treebagSA safs_initial treebagSBF caretSBF twoClassSim twoClassSim twoClassSummary postResample update.gafs update.safs update.rfe rfe update.safs update.safs update.train update.train upSample downSample varImp varImp varImp.avNNet varImp varImp.bagEarth varImp varImp.bagFDA varImp varImp.C5.0 varImp varImp.classbagg varImp varImp.cubist varImp varImp.dsa varImp varImp.earth varImp varImp.fda varImp varImp.gafs varImp.gafs varImp.Gam varImp varImp.gam varImp varImp.gbm varImp varImp.glm varImp varImp.glmnet varImp varImp.JRip varImp varImp.lm varImp varImp.multinom varImp varImp.mvr varImp varImp.nnet varImp varImp.pamrtrained varImp varImp.PART varImp varImp.plsda varImp varImp.RandomForest varImp varImp.randomForest varImp varImp.regbagg varImp varImp.rfe varImp varImp.rpart varImp varImp.RRF varImp varImp.safs varImp.gafs varImp.train varImp var_seq var_seq well_numbered caret-internal xyplot.calibration calibration xyplot.lift lift xyplot.resamples xyplot.resamples xyplot.rfe densityplot.rfe xyplot.train histogram.train