/*========================================================================= * * Copyright Insight Software Consortium * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ #ifndef itkShapePriorSegmentationLevelSetFunction_hxx #define itkShapePriorSegmentationLevelSetFunction_hxx #include "itkShapePriorSegmentationLevelSetFunction.h" #include "itkMath.h" namespace itk { /** * Constructor */ template< typename TImageType, typename TFeatureImageType > ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > ::ShapePriorSegmentationLevelSetFunction() { m_ShapeFunction = ITK_NULLPTR; m_ShapePriorWeight = NumericTraits< ScalarValueType >::ZeroValue(); } /** * PrintSelf */ template< typename TImageType, typename TFeatureImageType > void ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > ::PrintSelf(std::ostream & os, Indent indent) const { Superclass::PrintSelf(os, indent); os << indent << "ShapeFunction: " << m_ShapeFunction.GetPointer() << std::endl; os << indent << "ShapePriorWeight: " << m_ShapePriorWeight << std::endl; } /** * Compute the equation value. */ template< typename TImageType, typename TFeatureImageType > typename ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > ::PixelType ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > ::ComputeUpdate( const NeighborhoodType & neighborhood, void *gd, const FloatOffsetType & offset) { // Compute the generic level set update using superclass PixelType value = this->Superclass::ComputeUpdate(neighborhood, gd, offset); // Add the shape prior term if ( m_ShapeFunction && Math::NotExactlyEquals(m_ShapePriorWeight, NumericTraits< ScalarValueType >::ZeroValue()) ) { IndexType idx = neighborhood.GetIndex(); ContinuousIndex< double, ImageDimension > cdx; for ( unsigned int i = 0; i < ImageDimension; ++i ) { cdx[i] = static_cast< double >( idx[i] ) - offset[i]; } typename ShapeFunctionType::PointType point; this->GetFeatureImage()->TransformContinuousIndexToPhysicalPoint(cdx, point); ScalarValueType shape_term = m_ShapePriorWeight * ( m_ShapeFunction->Evaluate(point) - neighborhood.GetCenterPixel() ); value += shape_term; // collect max change to be used for calculating the time step ShapePriorGlobalDataStruct *globalData = (ShapePriorGlobalDataStruct *)gd; globalData->m_MaxShapePriorChange = std::max( globalData->m_MaxShapePriorChange, itk::Math::abs(shape_term) ); } return value; } /** * Compute the global time step. */ template< typename TImageType, typename TFeatureImageType > typename ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > ::TimeStepType ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > ::ComputeGlobalTimeStep(void *gd) const { TimeStepType dt; ShapePriorGlobalDataStruct *d = (ShapePriorGlobalDataStruct *)gd; d->m_MaxAdvectionChange += d->m_MaxPropagationChange + d->m_MaxShapePriorChange; if ( itk::Math::abs(d->m_MaxCurvatureChange) > 0.0 ) { if ( d->m_MaxAdvectionChange > 0.0 ) { dt = std::min( ( this->m_WaveDT / d->m_MaxAdvectionChange ), ( this->m_DT / d->m_MaxCurvatureChange ) ); } else { dt = this->m_DT / d->m_MaxCurvatureChange; } } else { if ( d->m_MaxAdvectionChange > 0.0 ) { dt = this->m_WaveDT / d->m_MaxAdvectionChange; } else { dt = 0.0; } } double maxScaleCoefficient = 0.0; for ( unsigned int i = 0; i < ImageDimension; i++ ) { maxScaleCoefficient = std::max(this->m_ScaleCoefficients[i], maxScaleCoefficient); } dt /= maxScaleCoefficient; // reset the values d->m_MaxAdvectionChange = 0; d->m_MaxPropagationChange = 0; d->m_MaxCurvatureChange = 0; d->m_MaxShapePriorChange = 0; return dt; } } // end namespace itk #endif