/*========================================================================= * * Copyright Insight Software Consortium * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ #ifndef itkUpdateShiSparseLevelSet_h #define itkUpdateShiSparseLevelSet_h #include "itkImage.h" #include "itkDiscreteLevelSetImage.h" #include "itkShiSparseLevelSetImage.h" #include "itkImageRegionIteratorWithIndex.h" #include "itkShapedNeighborhoodIterator.h" #include "itkNeighborhoodAlgorithm.h" #include "itkLabelMapToLabelImageFilter.h" #include "itkLabelImageToLabelMapFilter.h" namespace itk { /** * \class UpdateShiSparseLevelSet * \brief Base class for updating the Shi representation of level-set function * * \tparam VDimension Dimension of the input space * \tparam TEquationContainer Container of the system of levelset equations * \ingroup ITKLevelSetsv4 */ template< unsigned int VDimension, typename TEquationContainer > class ITK_TEMPLATE_EXPORT UpdateShiSparseLevelSet : public Object { public: typedef UpdateShiSparseLevelSet Self; typedef SmartPointer< Self > Pointer; typedef SmartPointer< const Self > ConstPointer; typedef Object Superclass; /** Method for creation through object factory */ itkNewMacro( Self ); /** Run-time type information */ itkTypeMacro( UpdateShiSparseLevelSet, Object ); itkStaticConstMacro( ImageDimension, unsigned int, VDimension ); typedef ShiSparseLevelSetImage< ImageDimension > LevelSetType; typedef typename LevelSetType::Pointer LevelSetPointer; typedef typename LevelSetType::InputType LevelSetInputType; typedef typename LevelSetType::OutputType LevelSetOutputType; typedef typename LevelSetType::OffsetType LevelSetOffsetType; typedef typename LevelSetType::LabelMapType LevelSetLabelMapType; typedef typename LevelSetType::LabelMapPointer LevelSetLabelMapPointer; typedef typename LevelSetType::LabelObjectType LevelSetLabelObjectType; typedef typename LevelSetType::LabelObjectPointer LevelSetLabelObjectPointer; typedef typename LevelSetType::LabelObjectLengthType LevelSetLabelObjectLengthType; typedef typename LevelSetType::LabelObjectLineType LevelSetLabelObjectLineType; typedef typename LevelSetType::LayerType LevelSetLayerType; typedef typename LevelSetType::LayerIterator LevelSetLayerIterator; typedef typename LevelSetType::LayerConstIterator LevelSetLayerConstIterator; typedef typename LevelSetType::OutputRealType LevelSetOutputRealType; typedef typename LevelSetType::LayerMapType LevelSetLayerMapType; typedef typename LevelSetType::LayerMapIterator LevelSetLayerMapIterator; typedef typename LevelSetType::LayerMapConstIterator LevelSetLayerMapConstIterator; typedef TEquationContainer EquationContainerType; typedef typename EquationContainerType::Pointer EquationContainerPointer; typedef typename EquationContainerType::TermContainerPointer TermContainerPointer; itkGetModifiableObjectMacro(OutputLevelSet, LevelSetType ); /** Update function for initializing and computing the output level set */ void Update(); /** Set/Get the sparse levet set image */ itkSetObjectMacro( InputLevelSet, LevelSetType ); itkGetModifiableObjectMacro(InputLevelSet, LevelSetType ); /** Set/Get the RMS change for the update */ itkGetMacro( RMSChangeAccumulator, LevelSetOutputRealType ); /** Set/Get the Equation container for computing the update */ itkSetObjectMacro( EquationContainer, EquationContainerType ); itkGetModifiableObjectMacro(EquationContainer, EquationContainerType ); /** Set/Get the current level set id */ itkSetMacro( CurrentLevelSetId, IdentifierType ); itkGetMacro( CurrentLevelSetId, IdentifierType ); protected: UpdateShiSparseLevelSet(); virtual ~UpdateShiSparseLevelSet() ITK_OVERRIDE; // output LevelSetPointer m_OutputLevelSet; IdentifierType m_CurrentLevelSetId; LevelSetOutputRealType m_RMSChangeAccumulator; EquationContainerPointer m_EquationContainer; typedef Image< int8_t, ImageDimension > LabelImageType; typedef typename LabelImageType::Pointer LabelImagePointer; LabelImagePointer m_InternalImage; typedef ShapedNeighborhoodIterator< LabelImageType > NeighborhoodIteratorType; /** Update +1 level set layers by checking the direction of the movement towards -1 */ // this is the same as Procedure 2 // Input is a update image point m_UpdateImage // Input is also ShiSparseLevelSetImagePointer void UpdateLayerPlusOne(); /** Update -1 level set layers by checking the direction of the movement towards +1 */ void UpdateLayerMinusOne(); /** Return true if there is a pixel from the opposite layer (+1 or -1) moving in the same direction */ bool Con( const LevelSetInputType& idx, const LevelSetOutputType& currentStatus, const LevelSetOutputRealType& currentUpdate ) const; private: ITK_DISALLOW_COPY_AND_ASSIGN(UpdateShiSparseLevelSet); // input LevelSetPointer m_InputLevelSet; LevelSetOffsetType m_Offset; typedef std::pair< LevelSetInputType, LevelSetOutputType > NodePairType; }; } #ifndef ITK_MANUAL_INSTANTIATION #include "itkUpdateShiSparseLevelSet.hxx" #endif #endif // itkUpdateShiSparseLevelSet_h